Tokyo Japan Boutique Hotels with Spa

List Of Best Boutique Hotels with Spa Tokyo

We have created a list with the best boutique hotels with spa in Tokyo, Japan. Hope you enjoy it. We think it might be the best of its kind around

boutique hotels in Tokyo
Hotel
106-0031 Tokyo-to, 港区西麻布1-13-17, Japan

Welcome to HOTELみなと-MINATO-, a warm and inviting place located in the heart of Tokyo. Just a short walk away, you'll find the beautiful Sakurada Shrine, only 500 meters from our entrance, and the fascinating Isehan-Honten Museum of Beni, which is about 700 meters away. Our hotel offers a relaxing spa and wellness center, where you can unwind and rejuvenate during your stay. We strive to create a comfortable and welcoming environment for everyone, so you can feel at home while exploring the vibrant city around you.

Show more
  • Hot Tub
    Hot Tub
  • Spa
    Spa
  • Fireplace/Heating
    Fireplace/Heating
  • Air Conditioner
    Air Conditioner
  • Highly Rated
    Highly Rated
  • Family Friendly
3 Baths726.57 ft²
9.5

Exceptional

315 reviews

$892.83
Average price / night
Check Availability
boutique hotels in Tokyo
Hotel
105-0001 Tokyo-to, Minato-ku Toranomon 2-10-4, Japan

Welcome to The Okura Heritage Tokyo, a welcoming retreat in the heart of Tokyo. We provide comfortable, air-conditioned rooms equipped with free WiFi, so you can stay connected during your visit. Enjoy the convenience of complimentary private parking and thoughtful room service to make your stay even more enjoyable. Our on-site restaurant offers delicious dining options for you to savor. We’re here to ensure you have a pleasant and memorable experience!

Show more
  • Private Pool
    Private Pool
  • Hot Tub
    Hot Tub
  • Spa
    Spa
  • Fireplace/Heating
    Fireplace/Heating
  • Highly Rated
    Highly Rated
  • Free Cancellation
15 Baths652.29 ft²
9.4

Exceptional

151 reviews

$658.96
Average price / night
Check Availability
boutique hotels in Tokyo
Hotel
107-0061 Tokyo-to, Minato-ku Kitaaoyama 2-14-4, Japan

Welcome to THE AOYAMA GRAND HOTEL, located in the heart of Tokyo and just a short walk from The Watarium Museum of Contemporary Art. We are excited to offer you a comfortable stay with a variety of amenities designed for your enjoyment. Here, you can explore the city on our complimentary bikes, enjoy the convenience of private parking, or stay active at our fitness center. After a day of adventure, unwind on our lovely terrace, where you can relax and take in the beautiful surroundings. Whether you're visiting for business or leisure, we strive to make your experience memorable and enjoyable. We look forward to welcoming you!

Show more
  • Spa
    Spa
  • Fireplace/Heating
    Fireplace/Heating
  • Balcony/Terrace
    Balcony/Terrace
  • Breakfast
    Breakfast
  • Highly Rated
    Highly Rated
  • Family Friendly
9 Baths557.03 ft²
9.6

Exceptional

804 reviews

$562.09
Average price / night
Check Availability
boutique hotels in Tokyo
Hotel
100-0005 Tokyo-to, Chiyoda-ku Marunouchi 1-1-1, Japan

Nestled in the vibrant Marunouchi business district, Palace Hotel Tokyo offers a welcoming and luxurious experience for everyone. Here, you can enjoy a relaxing spa, an accessible fitness center, and a lovely indoor swimming pool—all available to our guests at no extra cost. We invite you to come and unwind in this beautifully designed space that caters to your comfort and well-being.

Show more
  • Private Pool
    Private Pool
  • Spa
    Spa
  • Fireplace/Heating
    Fireplace/Heating
  • Pool
    Pool
  • Highly Rated
    Highly Rated
  • Free Cancellation
17 Baths677.64 ft²
9.6

Exceptional

262 reviews

$694.16
Average price / night
Check Availability
boutique hotels in Tokyo
Hotel
108-8612 Tokyo-to, Minatoku 3-13-1, Japan

Welcome to Takanawa Hanakohro, a welcoming ryokan nestled within the Grand Prince Hotel Takanawa in Tokyo. We're just a short distance of 2.3 km from the beautiful Ebisu Garden Place, making it easy for you to explore the area. During your stay, feel free to enjoy delicious meals at our on-site restaurant, where we prioritize fresh and flavorful dishes. Each of our guest rooms is equipped with air conditioning to ensure your comfort throughout your visit. We look forward to providing you with a warm and inviting experience during your time with us!

Show more
  • Spa
    Spa
  • Fireplace/Heating
    Fireplace/Heating
  • View
    View
  • Parking
    Parking
  • Highly Rated
    Highly Rated
  • Free Cancellation
5 Baths731.94 ft²
9.2

Exceptional

277 reviews

$1056.08
Average price / night
Check Availability
boutique hotels in Tokyo
Hotel
100-0005 Tokyo-to, Chiyoda-ku Marunouchi 1-9-1, Japan

The Tokyo Station Hotel reopened in 2012 after extensive renovations, and it has been recognized as an Important Cultural Property. This beautiful hotel offers stunning rooms decorated in a classic European style, providing guests with a unique and comfortable experience. One of the highlights is its French restaurant, where you can enjoy delicious meals in a warm and inviting atmosphere. Whether you're visiting for business or leisure, the hotel aims to make your stay memorable and enjoyable.

Show more
  • Spa
    Spa
  • Fireplace/Heating
    Fireplace/Heating
  • Breakfast
    Breakfast
  • Parking
    Parking
  • Highly Rated
    Highly Rated
  • Free Cancellation
28 Baths455.93 ft²
9.5

Exceptional

1375 reviews

$682.36
Average price / night
Check Availability
boutique hotels in Tokyo
Hotel
102-8585 Tokyo-to, Chiyoda-ku, Kioicho 1-2, Japan

Just a short, easy walk from Akasaka-Mitsuke Station on the Tokyo Metro Ginza and Marunouchi Lines, The Prince Gallery Tokyo Kioicho offers a friendly and welcoming atmosphere. You can enjoy free WiFi throughout the hotel, making it convenient for staying connected with loved ones or planning your adventures in the city. Whether you're here for business or leisure, we want to ensure you feel right at home.

Show more
  • Private Pool
    Private Pool
  • Spa
    Spa
  • Fireplace/Heating
    Fireplace/Heating
  • Pool
    Pool
  • Highly Rated
    Highly Rated
  • Free Cancellation
1 Baths597.88 ft²
9.4

Exceptional

370 reviews

$548.75
Average price / night
Check Availability
boutique hotels in Tokyo
Hotel
105-0001 Tokyo-to, Minato-ku, Toranomon 1-23-4 , Japan
  • Private Pool
    Private Pool
  • Hot Tub
    Hot Tub
  • Spa
    Spa
  • Fireplace/Heating
    Fireplace/Heating
  • Highly Rated
    Highly Rated
  • Free Cancellation
11 Baths640.94 ft²
9.2

Exceptional

188 reviews

$739.64
Average price / night
Check Availability
boutique hotels in Tokyo
Hotel
160-0021 Tokyo-to, 1-29-1 Kabukicho, Shinjuku, Japan

Welcome to BELLUSTAR TOKYO, A Pan Pacific Hotel! We are excited to share our space with you. Located in the heart of Tokyo, just a short 200-meter walk from the Seibu Shinjuku PePe Shopping Mall, our hotel offers a variety of amenities designed to enhance your stay. Whether you're looking to stay active at our fitness center, enjoy a delicious meal at our restaurant, or unwind with a drink at our bar, we have something for everyone. We prioritize your comfort and well-being, and our friendly staff is here to assist you with anything you need during your visit. We can't wait to welcome you!

Show more
  • Spa
    Spa
  • Fireplace/Heating
    Fireplace/Heating
  • Breakfast
    Breakfast
  • Parking
    Parking
  • Highly Rated
    Highly Rated
  • Free Cancellation
11 Baths642.9 ft²
9.5

Exceptional

292 reviews

$468.12
Average price / night
Check Availability
boutique hotels in Tokyo
Hotel
100-0014 Tokyo-to, Chiyoda-ku Nagatacho 2-10-3 , Japan

Welcome to a peaceful retreat just moments away from the city's hustle and bustle. At The Capitol Hotel Tokyu, you'll find 13 inviting suites and 251 comfortable guest rooms, each offering over 45 square meters of space for you to unwind and relax. We prioritize your comfort and well-being, ensuring that every aspect of your stay feels welcoming and accommodating.

Show more
  • Private Pool
    Private Pool
  • Hot Tub
    Hot Tub
  • Spa
    Spa
  • Fireplace/Heating
    Fireplace/Heating
  • Highly Rated
    Highly Rated
  • Free Cancellation
14 Baths691.2 ft²
9.5

Exceptional

379 reviews

$639.97
Average price / night
Check Availability
boutique hotels in Tokyo
Hotel
112-8680 Tokyo-to, Bunkyo-ku, Sekiguchi 2-10-8, Japan
  • Private Pool
    Private Pool
  • Hot Tub
    Hot Tub
  • Spa
    Spa
  • Fireplace/Heating
    Fireplace/Heating
  • Highly Rated
    Highly Rated
  • Free Cancellation
29 Baths682.21 ft²
9.5

Exceptional

789 reviews

$635.39
Average price / night
Check Availability
boutique hotels in Tokyo
Hotel
103-8328 Tokyo-to, Chuo-ku Nihonbashi Muromachi 2-1-1, Japan
  • Hot Tub
    Hot Tub
  • Spa
    Spa
  • Fireplace/Heating
    Fireplace/Heating
  • Breakfast
    Breakfast
  • Highly Rated
    Highly Rated
  • Free Cancellation
22 Baths1088.35 ft²
9.2

Exceptional

546 reviews

$590.71
Average price / night
Check Availability
boutique hotels in Tokyo
Hotel
150-8512 Tokyo-to, Shibuya-ku, Sakuragaokacho 26-1, Japan
  • Spa
    Spa
  • Fireplace/Heating
    Fireplace/Heating
  • View
    View
  • Breakfast
    Breakfast
  • Highly Rated
    Highly Rated
  • Free Cancellation
40 Baths496.75 ft²
9.1

Exceptional

2133 reviews

$550.69
Average price / night
Check Availability
boutique hotels in Tokyo
Hotel
100-0006 Tokyo-to, Chiyoda-ku Yurakucho 1-8-1, Japan
  • Private Pool
    Private Pool
  • Oceanfront
    Oceanfront
  • Hot Tub
    Hot Tub
  • Spa
    Spa
  • Highly Rated
    Highly Rated
  • Ocean View
19 Baths842.42 ft²
9.2

Exceptional

422 reviews

$849.32
Average price / night
Check Availability
boutique hotels in Tokyo
Hotel
100-8283 Tokyo-to, Chiyoda-ku, Marunouchi Trust Tower Main, 1-8-3 Marunouchi,, Japan
  • Private Pool
    Private Pool
  • Hot Tub
    Hot Tub
  • Spa
    Spa
  • Fireplace/Heating
    Fireplace/Heating
  • Highly Rated
    Highly Rated
  • Family Friendly
9 Baths581.26 ft²
9.2

Exceptional

329 reviews

$973
Average price / night
Check Availability
boutique hotels in Tokyo
Hotel
105-7337 Tokyo-to, Minato-ku, Higashi-Shinbashi 1-9-1, Japan
  • Private Pool
    Private Pool
  • Spa
    Spa
  • Fireplace/Heating
    Fireplace/Heating
  • Pool
    Pool
  • Highly Rated
    Highly Rated
  • Family Friendly
1 Baths691.42 ft²
9.1

Exceptional

186 reviews

$610.85
Average price / night
Check Availability
boutique hotels in Tokyo
Hotel
105-7227 Tokyo-to, Minato-ku Higashi Shimbashi 1-7-1, Japan
  • Spa
    Spa
  • Fireplace/Heating
    Fireplace/Heating
  • Breakfast
    Breakfast
  • Parking
    Parking
  • Price Dropped
    Price Dropped
  • Free Cancellation
15 Baths311.44 ft²
9

Exceptional

3479 reviews

$246.9
Average price / night
Check Availability
boutique hotels in Tokyo
Hotel
105-8563 Tokyo-to, Minato-ku, Shiba Koen 4-8-1 , Japan
  • Private Pool
    Private Pool
  • Hot Tub
    Hot Tub
  • Spa
    Spa
  • Fireplace/Heating
    Fireplace/Heating
44 Baths582.23 ft²
8.7

Exceptional

3416 reviews

$372.93
Average price / night
Check Availability

Most booked boutique hotels with Spa in Tokyo

boutique hotels in Tokyo
105-7227 Tokyo-to, Minato-ku Higashi Shimbashi 1-7-1, Japan
9
3479 reviews
From $246.9
boutique hotels in Tokyo
105-8563 Tokyo-to, Minato-ku, Shiba Koen 4-8-1 , Japan
8.7
3416 reviews
From $372.93
boutique hotels in Tokyo
150-8512 Tokyo-to, Shibuya-ku, Sakuragaokacho 26-1, Japan
9.1
2133 reviews
From $550.69

Budget Boutique Hotels with Spa in Tokyo

boutique hotels in Tokyo
105-7227 Tokyo-to, Minato-ku Higashi Shimbashi 1-7-1, Japan
9
3479 reviews
From $246.9
boutique hotels in Tokyo
105-8563 Tokyo-to, Minato-ku, Shiba Koen 4-8-1 , Japan
8.7
3416 reviews
From $372.93
boutique hotels in Tokyo
160-0021 Tokyo-to, 1-29-1 Kabukicho, Shinjuku, Japan
9.5
292 reviews
From $468.12

Compare the Best Boutique Hotels with Spa in Tokyo – Addresses, Prices, Stars, Rating, and Review Count

Hotel Name Address Price ($)Star Rating Review Count Book
HOTELみなと-MINATO-106-0031 Tokyo-to, 港区西麻布1-13-17, Japan892.8349.5315
The Okura Heritage Tokyo105-0001 Tokyo-to, Minato-ku Toranomon 2-10-4, Japan658.9659.4151
THE AOYAMA GRAND HOTEL107-0061 Tokyo-to, Minato-ku Kitaaoyama 2-14-4, Japan562.0959.6804
Palace Hotel Tokyo100-0005 Tokyo-to, Chiyoda-ku Marunouchi 1-1-1, Japan694.1659.6262
Takanawa Hanakohro - in Grand Prince Hotel Takanawa108-8612 Tokyo-to, Minatoku 3-13-1, Japan1056.0859.2277
The Tokyo Station Hotel100-0005 Tokyo-to, Chiyoda-ku Marunouchi 1-9-1, Japan682.3659.51375
The Prince Gallery Tokyo Kioicho, a Luxury Collection Hotel102-8585 Tokyo-to, Chiyoda-ku, Kioicho 1-2, Japan548.7559.4370
Andaz Tokyo - A Concept by Hyatt105-0001 Tokyo-to, Minato-ku, Toranomon 1-23-4 , Japan739.6459.2188
BELLUSTAR TOKYO, A Pan Pacific Hotel160-0021 Tokyo-to, 1-29-1 Kabukicho, Shinjuku, Japan468.1259.5292
The Capitol Hotel Tokyu100-0014 Tokyo-to, Chiyoda-ku Nagatacho 2-10-3 , Japan639.9759.5379
Hotel Chinzanso Tokyo112-8680 Tokyo-to, Bunkyo-ku, Sekiguchi 2-10-8, Japan635.3959.5789
Mandarin Oriental, Tokyo103-8328 Tokyo-to, Chuo-ku Nihonbashi Muromachi 2-1-1, Japan590.7159.2546
Cerulean Tower Tokyu Hotel, A Pan Pacific Partner Hotel150-8512 Tokyo-to, Shibuya-ku, Sakuragaokacho 26-1, Japan550.6959.12133
The Peninsula Tokyo100-0006 Tokyo-to, Chiyoda-ku Yurakucho 1-8-1, Japan849.3259.2422
Shangri-La Tokyo100-8283 Tokyo-to, Chiyoda-ku, Marunouchi Trust Tower Main, 1-8-3 Marunouchi,, Japan97359.2329
Conrad Tokyo105-7337 Tokyo-to, Minato-ku, Higashi-Shinbashi 1-9-1, Japan610.8559.1186
Park Hotel Tokyo105-7227 Tokyo-to, Minato-ku Higashi Shimbashi 1-7-1, Japan246.9493479
The Prince Park Tower Tokyo - Preferred Hotels & Resorts, LVX Collection105-8563 Tokyo-to, Minato-ku, Shiba Koen 4-8-1 , Japan372.9358.73416

Note: The prices for each boutique hotels in Tokyo do vary. This can be because of the number of people you are booking for, how far in advance you book and the season. The prices above are only meant as a rough estimate for comparison purposes. Click the buttons above (or click here>) to get the latest prices.

Top 8 Attractions in the Tokyo, Japan

When planning your luxury or boutique stay in Tokyo, Japan, you’ll find a diverse array of attractions that perfectly complement your experience in this vibrant city.

Senso-ji Temple: Step into the spiritual heart of Tokyo at Senso-ji Temple, where the stunning architecture and serene atmosphere will enrich your cultural journey.

Shibuya Crossing: Experience the iconic Shibuya Crossing, renowned for its bustling energy and vibrant surroundings, making it a must-see for anyone visiting during their boutique stay in Tokyo, Japan.

Tokyo Skytree: Ascend the Tokyo Skytree for breathtaking panoramic views of the city skyline, offering an unforgettable perspective that complements your luxurious getaway.

Meiji Shrine: Embrace tranquility at the Meiji Shrine, a lush oasis nestled in the heart of the city, perfect for a peaceful retreat after a day of exploration.

Tsukiji Outer Market: Delve into culinary delights at the Tsukiji Outer Market, where you can savor fresh sushi and local delicacies, enhancing your gourmet experience during your stay.

Akihabara Electric Town: Immerse yourself in the unique culture of Akihabara Electric Town, a hotspot for anime and tech enthusiasts, showcasing modern Japanese trends.

Ueno Park: Stroll through Ueno Park, home to museums and cherry blossoms, ideal for unwinding and soaking in the natural beauty during your Tokyo adventure.

Odaiba Island: Discover the futuristic landscape of Odaiba Island, featuring shopping, entertainment, and spectacular views of Tokyo Bay, creating the perfect backdrop for your luxury escape.

Frequently Asked Questions