Kyoto Japan Boutique Hotels with Spa

List Of Best Boutique Hotels with Spa Kyoto

We have created a list with the best boutique hotels with spa in Kyoto, Japan. Hope you enjoy it. We think it might be the best of its kind around

boutique hotels in Kyoto
Hotel
602-0841 Kyoto, Kyoto, 447-6 Kajiicho, Kamigyo Ward, Japan

Kamo Residences by Reflections is conveniently located in Kyoto, just 1.8 km from the beautiful Kyoto Imperial Palace. We are here to make your stay enjoyable with our friendly concierge services, comfortable non-smoking rooms, and a lovely garden area where you can relax. You’ll also have free WiFi throughout the property to stay connected during your visit. Our goal is to create a welcoming atmosphere for everyone, ensuring that you feel right at home.

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Boutique hotel amenities:

Wellness Facilities • Entertainment • Transportation/Shuttle • Restaurant • Oceanfront • Sports/Activities • Ocean View • Spa

boutique hotels in Kyoto
Hotel
605-0074 Kyoto, Kyoto, Higashiyama-ku Gionmachi Minamigawa 570-89, Japan

Welcome to Hotel Gion Ichirin, conveniently located in beautiful Kyoto, just a short 800 meters from Gion Shijo Station. We’re here to make your stay comfortable and enjoyable! Our hotel features cozy, non-smoking rooms and a welcoming shared lounge where you can relax and connect with fellow guests. Plus, we offer free WiFi throughout the property so you can stay connected with loved ones or plan your next adventure. If you need assistance with your luggage, our friendly staff is always happy to help. We look forward to making your experience in Kyoto memorable!

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Boutique hotel amenities:

Wellness Facilities • Spa • Entertainment

boutique hotels in Kyoto
Hotel
600-8126 Kyoto, Kyoto, Shimogyo-ku Kagiya cho 342, Japan

Marufukuro is a welcoming place to stay in Kyoto, offering a beautiful garden, a cozy lounge, and a lovely terrace for guests to enjoy. There's also a restaurant on-site where you can savor delicious meals. If you’re looking to explore, you’ll find several popular attractions nearby, like the TKP Garden City Kyoto, which is just about a 15-minute walk away. Whether you're here for relaxation or adventure, Marufukuro aims to provide a comfortable and enjoyable experience for everyone.

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Boutique hotel amenities:

Child Friendly • Restaurant • Entertainment • Sports/Activities • Wellness Facilities • Spa

boutique hotels in Kyoto
Hotel
605-0821 Kyoto, Kyoto, Higashiyama-ku, Kiyoi-cho 480, Japan

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Boutique hotel amenities:

Entertainment • Restaurant • Wellness Facilities • Spa

boutique hotels in Kyoto
Hotel
604-0051 Kyoto, Kyoto, Nakagyo-ku Nijo-sagaru Aburano-koji St. Nijoaburanokoji-cho 284, Japan

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Boutique hotel amenities:

Hot Tub • Restaurant • Spa • Wellness Facilities • Entertainment • Child Friendly

boutique hotels in Kyoto
Hotel
604-8276 Kyoto, Kyoto, Nakagyo-ku Tsuboya-cho 450, Japan

Open from December 2018, MOGANA is located in Kyoto and features a garden and free WiFi. This hotel offers a 24-hour front desk. Set in the Nakagyo Ward district, the hotel is within 2625 feet of Kyoto International Manga Museum. Nijojo-Mae Station is a 5-minute walk, Karasuma Oike Station is an 8-minute walk and Kyoto Station is a 14-minute train ride away. All rooms in the hotel are equipped with a coffee machine. With a private bathroom fitted with a bath and free toiletries, certain units at MOGANA also feature a terrace. The units have a wardrobe. An American breakfast is available each morning at the property. Nijo Castle is 0.7 mi from the accommodations, while Samurai Kembu Kyoto is 1.4 mi away. The nearest airport is Itami Airport, 30 mi from the property.

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Boutique hotel amenities:

Spa • Business Services • Restaurant • Entertainment • Wellness Facilities

boutique hotels in Kyoto
Hotel
605-0826 Kyoto, Kyoto, Higashiyama-ku, Kodaiji Masuyacho 360, Japan

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Boutique hotel amenities:

Spa • Business Services • Entertainment • Hot Tub • Wellness Facilities • Child Friendly • Restaurant

boutique hotels in Kyoto
Hotel
600-8372 Kyoto, Kyoto, 466 Nishinotoincho, Shimogyo, Japan

Conveniently set in Kyoto, Dusit Thani Kyoto provides air-conditioned rooms, a fitness center, free WiFi and a garden. Providing a restaurant, the property also features a bar, as well as an indoor pool and a sauna. The property has room service, a 24-hour front desk and currency exchange for guests. Breakfast is available daily, and includes buffet, à la carte and American options. The hotel offers 5-star accommodations with a hot tub. Popular points of interest near Dusit Thani Kyoto include Kyoto Station, TKP Garden City Kyoto and Kyoto Shigaku Kaikan Conference Hall. The nearest airport is Itami Airport, 27 miles from the accommodation.

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Boutique hotel amenities:

Oceanfront • Private Pool • Wellness Facilities • Ocean View • Restaurant • Business Services • Spa • Sports/Activities

boutique hotels in Kyoto
Hotel
600-8022 Kyoto, Kyoto, Shimogyo-ku Kawaramachi dori 2 chome Inaricho 318-6 , Japan

GOOD NATURE HOTEL KYOTO has a fitness center, garden, a restaurant and bar in Kyoto. This 5-star hotel offers a 24-hour front desk, a concierge service and free WiFi. The property is a 4-minute walk from Gion Shijo Station, and within 1.1 miles of the city center. The hotel will provide guests with air-conditioned rooms with a desk, an electric tea pot, a fridge, a safety deposit box, a flat-screen TV and a private bathroom with a bidet. At GOOD NATURE HOTEL KYOTO rooms contain a seating area. A buffet, continental or Full English/Irish breakfast is available each morning at the property. Popular points of interest near the accommodation include Samurai Kembu Kyoto, Kyoto Shigaku Kaikan Conference Hall and Kyoto International Manga Museum. The nearest airport is Itami Airport, 29 miles from GOOD NATURE HOTEL KYOTO.

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Boutique hotel amenities:

Child Friendly • Wellness Facilities • Business Services • Restaurant • Spa • Entertainment • Sports/Activities

boutique hotels in Kyoto
Hotel
600-8176 Kyoto, Kyoto, 190 Kitamachi Karasuma-dori Rokujo-sagaru Shimogyo-ku, Japan

Just a 12-minute walk from Kyoto Station, hotel kanra kyoto is an entirely nonsmoking hotel, offering spacious rooms and a mix of traditional Japanese, modern and Western decor. All guest rooms feature free WiFi access and Japanese tatami (woven-straw) flooring. Rooms feature a Japanese-style seating area and traditional Kyoto Kiyomizu-yaki ceramics. There is a sink, and the private bathroom comes with a wooden bathtub and free toiletries. The 24-hour front desk provides concierge services and free luggage storage. There is a drinks vending machine on site and bicycles can be rented for an additional fee. The hotel offers Teppanyaki and Italian cuisine, and a cafe featuring local seasonal ingredients. Japanese-style and Western set menus are offered for breakfast. Nishiki Market is 14-minutes away via train and walk, while the Gion area, Kiyomizu-dera Temple and Nijo Temple are all within a 15-minute drive. Fushimi Inari-Taisha Shrine is 7-minutes from Kyoto Station via train and walk. The nearest airport is Osaka Itami Airport, a 50-minute drive away from the property.

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Boutique hotel amenities:

Child Friendly • Wellness Facilities • Spa • Business Services • Restaurant • Entertainment

boutique hotels in Kyoto
Hotel
600-8022 Kyoto, Kyoto, 2-324 Inaricho, Kawaramachidori Shijosagaru, Japan

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Boutique hotel amenities:

Restaurant • Hot Tub • Spa • Child Friendly • Wellness Facilities

boutique hotels in Kyoto
Resort
603 8451 Kyoto, Kyoto, Kita-ku Kinugasa Kagamiishi 44-1 , Japan

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Boutique hotel amenities:

Wellness Facilities • Transportation/Shuttle • Spa • Sports/Activities • Ocean View • Restaurant • Entertainment • Oceanfront

boutique hotels in Kyoto
Hotel
600-8216 Kyoto, Kyoto, Shimogyo-ku Higashishiokojicho 570, Japan

The Thousand Kyoto features air-conditioned rooms with satellite flat-screen TV in the Shimogyo Ward district of Kyoto. Among the facilities of this property are a restaurant, a 24-hour front desk and room service, along with free WiFi. Private parking is available on site. TKP Garden City Kyoto is 656 feet from The Thousand Kyoto, while Sanjusangen-do Temple is 0.7 mi from the property. The nearest airport is Itami Airport, 29 mi from the accommodations.

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Boutique hotel amenities:

Wellness Facilities • Restaurant • Child Friendly • Spa • Business Services

boutique hotels in Kyoto
Hotel
616-8385 Kyoto, Kyoto, 3 Sagatenryuji Susukinobabacho, Ukyo Ward, Japan

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Boutique hotel amenities:

Wellness Facilities • Spa • Sports/Activities • Restaurant • Entertainment

Most booked boutique hotels with Spa in Kyoto

boutique hotels in Kyoto
600-8022 Kyoto, Kyoto, Shimogyo-ku Kawaramachi dori 2 chome Inaricho 318-6 , Japan
9.1
2554 reviews
From $198
boutique hotels in Kyoto
600-8216 Kyoto, Kyoto, Shimogyo-ku Higashishiokojicho 570, Japan
9.1
1816 reviews
From $391
boutique hotels in Kyoto
600-8372 Kyoto, Kyoto, 466 Nishinotoincho, Shimogyo, Japan
9.2
865 reviews
From $282

Budget Boutique Hotels with Spa in Kyoto

boutique hotels in Kyoto
605-0074 Kyoto, Kyoto, Higashiyama-ku Gionmachi Minamigawa 570-89, Japan
9.5
133 reviews
From $182.02
boutique hotels in Kyoto
600-8022 Kyoto, Kyoto, Shimogyo-ku Kawaramachi dori 2 chome Inaricho 318-6 , Japan
9.1
2554 reviews
From $198
boutique hotels in Kyoto
600-8372 Kyoto, Kyoto, 466 Nishinotoincho, Shimogyo, Japan
9.2
865 reviews
From $282

Compare the Best Boutique Hotels with Spa in Kyoto – Addresses, Prices, Stars, Rating, and Review Count

Hotel Name Address Price ($) Star Rating Review Count Book
Kamo Residences by Reflections 602-0841 Kyoto, Kyoto, 447-6 Kajiicho, Kamigyo Ward, Japan 1837 5 9.8 20
Hotel Gion Ichirin 605-0074 Kyoto, Kyoto, Higashiyama-ku Gionmachi Minamigawa 570-89, Japan 182.02 3 9.5 133
Marufukuro 600-8126 Kyoto, Kyoto, Shimogyo-ku Kagiya cho 342, Japan 616 5 9.6 296
Sowaka 605-0821 Kyoto, Kyoto, Higashiyama-ku, Kiyoi-cho 480, Japan 648 5 9.3 339
HOTEL THE MITSUI KYOTO, a Luxury Collection Hotel & Spa 604-0051 Kyoto, Kyoto, Nakagyo-ku Nijo-sagaru Aburano-koji St. Nijoaburanokoji-cho 284, Japan 1054 5 9.5 207
MOGANA 604-8276 Kyoto, Kyoto, Nakagyo-ku Tsuboya-cho 450, Japan 351 5 9 552
Park Hyatt Kyoto 605-0826 Kyoto, Kyoto, Higashiyama-ku, Kodaiji Masuyacho 360, Japan 2146 5 9.4 45
Dusit Thani Kyoto 600-8372 Kyoto, Kyoto, 466 Nishinotoincho, Shimogyo, Japan 282 5 9.2 865
GOOD NATURE HOTEL KYOTO 600-8022 Kyoto, Kyoto, Shimogyo-ku Kawaramachi dori 2 chome Inaricho 318-6 , Japan 198 5 9.1 2554
hotel kanra kyoto 600-8176 Kyoto, Kyoto, 190 Kitamachi Karasuma-dori Rokujo-sagaru Shimogyo-ku, Japan 395 4 9.2 501
Sora Niwa Terrace Kyoto Bettei 600-8022 Kyoto, Kyoto, 2-324 Inaricho, Kawaramachidori Shijosagaru, Japan 818 5 9.4 276
ROKU KYOTO, LXR Hotels & Resorts 603 8451 Kyoto, Kyoto, Kita-ku Kinugasa Kagamiishi 44-1 , Japan 1778 5 9.3 61
THE THOUSAND KYOTO 600-8216 Kyoto, Kyoto, Shimogyo-ku Higashishiokojicho 570, Japan 391 5 9.1 1816
MUNI KYOTO by Onko Chishin 616-8385 Kyoto, Kyoto, 3 Sagatenryuji Susukinobabacho, Ukyo Ward, Japan 911 5 9.3 368

Note: The prices for each boutique hotels in Kyoto do vary. This can be because of the number of people you are booking for, how far in advance you book and the season. The prices above are only meant as a rough estimate for comparison purposes. Click the buttons above (or click here>) to get the latest prices.

Top 8 Attractions & Things to Do in Kyoto, Japan

Luxury or Boutique stay in Kyoto, Japan: After settling into your exquisite boutique hotel, immerse yourself in the enchanting culture and beauty of Kyoto by exploring these must-see attractions.

Kinkaku-ji (Golden Pavilion): This stunning Zen Buddhist temple is famed for its shimmering gold leaf exterior and serene surrounding gardens, offering a perfect spot for reflection.

Fushimi Inari Taisha: Wander through thousands of vibrant vermillion torii gates that form picturesque pathways up Mt. Inari, showcasing Kyoto’s spiritual heritage.

Kiyomizu-dera Temple: Perched on a hillside, this historic temple offers breathtaking views of cherry blossoms in spring and colorful foliage in autumn, making it an ideal photo opportunity.

Arashiyama Bamboo Grove: Stroll through towering stalks of bamboo that sway gently in the breeze, creating a magical atmosphere that's perfect for leisurely exploration or peaceful contemplation.

Nijo Castle: Experience the grandeur of this UNESCO World Heritage Site, known for its beautiful gardens and nightingale floors that chirp as you walk, providing an auditory delight.

Gion District: Step into the heart of Kyoto’s geisha culture by visiting this historic district, where you can enjoy traditional tea houses and possibly catch a glimpse of a geiko or maiko.

Philosopher's Path: Take a tranquil stroll along this charming canal-side walkway lined with cherry trees, offering a peaceful retreat amidst the hustle and bustle of the city.

Katsura Imperial Villa: Marvel at the exquisite architecture and meticulously designed gardens of this imperial retreat, which represents the pinnacle of Japanese aesthetics and design.

Frequently Asked Questions

Popular boutique hotels in Kyoto that have a pool include:

  • Dusit Thani Kyoto.- Review Count: 865, Rating: 9.2

Transportation/Shuttle service is available at the following boutique hotels in Kyoto:

  • Kamo Residences by Reflections.- Review Count: 20, Rating: 9.8
  • ROKU KYOTO, LXR Hotels & Resorts.- Review Count: 61, Rating: 9.3

A spa is available to guests at the following boutique hotels in Kyoto:

  • Kamo Residences by Reflections.- Review Count: 20, Rating: 9.8
  • Hotel Gion Ichirin.- Review Count: 133, Rating: 9.5
  • Marufukuro.- Review Count: 296, Rating: 9.6

Families traveling in Kyoto enjoyed their stay at the following boutique hotels:

  • Kamo Residences by Reflections.- Review Count: 20, Rating: 9.8
  • Marufukuro.- Review Count: 296, Rating: 9.6
  • HOTEL THE MITSUI KYOTO, a Luxury Collection Hotel & Spa.- Review Count: 207, Rating: 9.5

These 3 star hotels received great reviews from other travelers:

  • Hotel Gion Ichirin.- Review Count: 133, Rating: 9.5

Some of the best boutique hotels in Kyoto are:

  • GOOD NATURE HOTEL KYOTO.- Review Count: 2554, Rating: 9.1
  • THE THOUSAND KYOTO.- Review Count: 1816, Rating: 9.1
  • Dusit Thani Kyoto.- Review Count: 865, Rating: 9.2